Top 680 Java Software Engineer Jobs in Boston, MA

Bioinformatics Engineer
Dana-Farber Cancer Institute —Boston, MA
- $75,000 - $81,500 a year
- Full-time
- Hybrid work
- Computer Science
- Java
- Bachelor's degree
Java Software Engineer, K4B
KAYAK —Concord, MA
- $100,000 - $110,000 a year
- Full-time
- Hybrid work
- Mid-level
- Office
- 2 years
- Paid parental leave
- Paid holidays
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9d
Backend Java Developer
Fustis LLC —Boston, MA
- $65 a year
- Mid-level
- Office
- AWS
Quick Apply
Software Engineer I (Backend)
WHOOP —Boston, MA
- $105,000 - $145,000 a year
- Urgently hiring
- Computer science
- System design
- Office
SENIOR JAVA SOFTWARE DEVELOPER
Fundamental Interactions —Boston, MA
- Office
- Java
- Senior level
Java Lead Developer
supremesoft —Framingham, MA
- SQL
- Team management
- Senior level
Quick Apply
Software Development Engineer - Java
CVS Health —Boston, MA
- $79,310 - $158,620 a year
- Full-time
- System design
- Mid-level
- Bachelor's degree
- Health insurance
- Dental insurance
Java Developer
SVH Software —Chelmsford, MA
- Email
- Computer Science
- System design
- Java
Senior JAVA Software Engineer
KAYAK —Cambridge, MA
- $125,000 - $165,000 a year
- Full-time
- Hybrid work
- Office
- Senior level
- Paid parental leave
- Paid holidays
Quick Apply
Senior Cloud Java Engineer
Syndic8 DMS —Boston, MA
- Java
- Senior level
- Commuter assistance
- Paid holidays
9d
Software Engineer - Backend (FT)
Delsys —Natick, MA
- $90,000 - $105,000 a year
- Full-time
- Computer Science
- Mid-level
- Windows
- Profit sharing
- Disability insurance
BackEnd Developer-Boston, MA
Photon —Boston, MA
- $39,000 - $137,000 a year
- Full-time
- Mid-level
- SQL
- Paid holidays
- Health insurance
Full Stack Java Developer
Generic Solutions Inc. —Boston, MA
- $60 - $65 an hour
- Full-time
- 11+ years
- Office
- SQL
Quick Apply
9d
Temporary R&D Software Engineer
Northeastern University —Burlington, MA
- $35 an hour
- Part-time
- Computer Science
- Bachelor of Science
- Office
- Health insurance
- Dental insurance
Principal Software Engineer - Java/Spring Boot/AWS/Junit
Federal Reserve Bank of Boston —Boston, MA
- $173,400 - $260,000 a year
- Full-time
- Pass drug screening
- AWS
- JavaScript
- Opportunities for advancement
Software Engineer II (Backend, Growth)
WHOOP —Boston, MA
- Mid-level
- Java
- AWS
Senior Back End Software Developer (AI, Java, Vert.x, AWS) - Remote US
Revvity —Waltham, MA
- $130,000 - $158,000 a year
- Full-time
- Remote
- Java
- AWS
- Bachelor's degree
- Employee stock purchase plan
- Disability insurance
Backend Software Engineer
Next Insurance —Waltham, MA
- $127,000 - $171,000 a year
- Computer Science
- Bachelor of Science
- Mid-level
Quick Apply
Junior Software Engineer
JD Software Inc. —Salem, MA
- Full-time
- Computer Science
- System design
- Java
- Opportunities for advancement
Programmer Analyst
BCCUSA-MA —Norwood, MA
- Computer Science
- Mid-level
- Windows

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Java Software Engineer jobs near Boston, MA

Bioinformatics Engineer

Dana-Farber Cancer Institute -
Boston, MA

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Job Details

Full-time
$75,000 - $81,500 a year

Qualifications

Design of experiments
Bachelor's degree
Query management
Data analysis software

Full Job Description

Job Ref:

JR-4351

Location:

450 Brookline Ave, BOSTON, MA 02215

Category:

IT/Informatics

Employment Type:

Full time

Work Location:

Hybrid: 2-3 days onsite/week

Salary/Pay Rate:

$75,000.00 - $81,500.00 per year

Overview

The McGraw/Patterson Center for Population Sciences at the Dana-Farber Cancer Institute (DFCI) is seeking a motivated entry-level Bioinformatics Engineer to join its Data Management team, supporting high-impact research initiatives while contributing to the development of scalable data and AI-driven platforms.

This position is closely aligned with research programs at the Lowe Center for Thoracic (Lung) Oncology, leveraging a robust engineering and multi-cloud ecosystem, and providing a unique opportunity to collaborate directly with research and clinical teams focused on thoracic cancers within a cross-center model.

The successful candidate will work at the intersection of biology, data science, engineering, and AI—supporting immediate research needs while helping design and develop systems that scale across teams, centers, and the broader institute.

Located in Boston and the surrounding communities, Dana-Farber Cancer Institute is a leader in life changing breakthroughs in cancer research and patient care. We are united in our mission of conquering cancer, HIV/AIDS, and related diseases. We strive to create an inclusive, diverse, and equitable environment where we provide compassionate and comprehensive care to patients of all backgrounds, and design programs to promote public health particularly among high-risk and underserved populations. We conduct groundbreaking research that advances treatment, we educate tomorrow's physician/researchers, and we work with amazing partners, including other Harvard Medical School-affiliated hospitals.

PRIMARY DUTIES AND RESPONSIBILITIES:

Designs and develops software, databases and interfaces for analyzing and manipulating biological data.
Draws upon knowledge of biology to improve data mining and management techniques.
Collaborates with laboratory researchers to develop high throughput data processing and analysis capability.
Adds new software that has been internally developed or imported from outside sources to in-house systems.
Directs and guides DNA, RNA and protein sequence database searches and the computational analysis of resulting data.
Provides direct technical and scientific customer support and helps guide, implement and maintain further improvements to bioinformatics software.
Works with the entire life science team to diagnose and fix issues with software.

MINIMUM JOB QUALIFICATIONS:

Bachelors degree required, MS preferred or PhD in bioinformatics, computer science and/or the life sciences and 0-2 years relevant experience. Performs primary duties as above as directed and requires close to moderate supervision.

KNOWLEDGE, SKILLS, AND ABILITIES REQUIRED:

Familiarity with simple programming using Perl/Python or Java, statistical programming using R or related tools, web-development, and database query through SQL.
Familiarity with principles of experimental design and modern data analysis paradigms is required.
Strong interpersonal skills – ability to effectively interact with all levels of staff and external contacts.
Excellent analytical, organizational and time management skills.

At Dana-Farber Cancer Institute, we work every day to create an innovative, caring, and inclusive environment where every patient, family, and staff member feels they belong. As relentless as we are in our mission to reduce the burden of cancer for all, we are committed to having faculty and staff who offer multifaceted experiences. Cancer knows no boundaries and when it comes to hiring the most dedicated and compassionate professionals, neither do we. If working in this kind of organization inspires you, we encourage you to .

Dana-Farber Cancer Institute is an equal opportunity employer and affirms the right of every qualified applicant to receive consideration for employment without regard to race, color, religion, sex, gender identity or expression, national origin, sexual orientation, genetic information, disability, age, ancestry, military service, protected veteran status, or other characteristics protected by law.

EEO Poster

Pay Transparency Statement

The hiring range is based on market pay structures, with individual salaries determined by factors such as business needs, market conditions, internal equity, and based on the candidate’s relevant experience, skills and qualifications.

For union positions, the pay range is determined by the Collective Bargaining Agreement (CBA).

$75,000.00 - $81,500.00

Apply Now

Refine Your Search

Java Software Engineer jobs in Boston, MA

Bioinformatics Engineer

Java Software Engineer, K4B

Backend Java Developer

Software Engineer I (Backend)

SENIOR JAVA SOFTWARE DEVELOPER

Java Lead Developer

Software Development Engineer - Java

Java Developer

Senior JAVA Software Engineer

Senior Cloud Java Engineer

Software Engineer - Backend (FT)

BackEnd Developer-Boston, MA

Full Stack Java Developer

Temporary R&D Software Engineer

Principal Software Engineer - Java/Spring Boot/AWS/Junit

Software Engineer II (Backend, Growth)

Senior Back End Software Developer (AI, Java, Vert.x, AWS) - Remote US

Backend Software Engineer

Junior Software Engineer

Programmer Analyst

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