Top 6 Java/perl developer Jobs in San Ramon, Ca

Staff Scientist, Bioinformatics
Thermo Fisher Scientific —South San Francisco, CA
- $129,400 - $165,000 a year
- Full-time
- Background check
- 6 years
- Office
- Commuter assistance
- Paid parental leave
5d
Software Developer
Pddn —Fremont, CA
- Full-time
- Computer Science
- Mid-level
- Bachelor's degree
- Commuter assistance
- Disability insurance
Software Dev Engineer II
Amazon Development Center U.S., Inc. —East Palo Alto, CA
- $165,200 - $223,600 a year
- Full-time
- Computer science
- Computer Science
- System design
- AD&D insurance
- Health insurance
14d
Senior Mechanical Engineering Analyst
Lawrence Livermore National Laboratory —Livermore, CA
- $210,630 - $267,060 a year
- Full-time
- Hybrid work
- Pass drug screening
- Java
- Analysis skills
- Relocation assistance
- 401(k)
Software Development Engineer, Aurora MySQL Engine
Amazon Development Center U.S., Inc. —East Palo Alto, CA
- $165,200 - $223,600 a year
- Full-time
- Computer science
- Computer Science
- Software troubleshooting
- AD&D insurance
- Health insurance

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Staff Scientist, Bioinformatics

Thermo Fisher Scientific -
South San Francisco, CA

Apply Now

Job Details

Full-time
$129,400 - $165,000 a year
5 days ago

Benefits

Commuter assistance
Paid parental leave
Caregiver leave
Employee stock purchase plan
Paid holidays
Disability insurance
Health insurance
Dental insurance
401(k)
Tuition reimbursement
Paid time off
Parental leave
Employee assistance program
Vision insurance
Life insurance

Qualifications

Oncology

Full Job Description

Work Schedule

Standard (Mon-Fri)

Environmental Conditions

Office

Job Description

As part of the Thermo Fisher Scientific team, you’ll discover meaningful work that makes a positive impact on a global scale. Join our colleagues in bringing our Mission to life every single day to enable our customers to make the world healthier, cleaner and safer. We provide our global teams with the resources needed to achieve individual career goals while helping to take science a step beyond by developing solutions for some of the world’s toughest challenges, like protecting the environment, making sure our food is safe or helping find cures for cancer.

Discover Impactful Work

You’ll help develop advanced NGS workflows and bioinformatics solutions. You will contribute to developing fully automated, sample-to-report NGS workflows for both clinical and research applications, with a focus on oncology. Working with cross-functional teams of algorithm developers, software engineers, molecular biologists, and product managers, you will help advance genomic analysis and precision medicine.

Location

This is a fully onsite position based in South San Francisco, CA or Pleasanton, CA site. Relocation assistance is not available for this role.

A Day in the Life

Design, develop, and optimize bioinformatics pipelines supporting next-generation sequencing (NGS) workflows for oncology and other clinical and research applications
Develop automation tools and scalable software solutions to streamline genomic data processing and analysis
Collaborate with cross-functional teams, including software engineers, algorithm developers, molecular biologists, and product managers, to deliver integrated sample-to-report solutions
Validate bioinformatics algorithms and workflows while ensuring compliance with quality and regulatory standards
Translate customer and scientific requirements into technical specifications and software requirements
Support product development through data analysis, troubleshooting, testing, and documentation
Maintain clear technical documentation and contribute to continuous process improvement initiatives

Keys to Success

Education

Bachelor's degree in Bioinformatics, Computational Biology, Biomedical Engineering, or related biological field with 8+ years of experience in bioinformatics, with focus on NGS applications and oncology; OR Advanced Degree with 6+ years of experience

Experience

Experience developing bioinformatics pipelines and genomic analysis workflows in regulated environments
Proficiency with common bioinformatics tools and algorithms for NGS analysis
Experience with variant calling, sequence alignment, and functional annotation
Strong programming skills in Python, Perl, and shell scripting
Expertise working in Linux/Unix environments and relational databases
Experience with testing and documentation in regulated environments
Experience supporting cross-functional software or product development teams
Experience with cloud platforms (AWS) and containerization technologies

Knowledge, Skills, and Abilities

Knowledge of statistical analysis and machine learning techniques
Familiarity with Java programming is desired
Demonstrated project coordination and cross-functional team collaboration
Clear written and verbal communication skills
Detail-oriented with ability to adapt to team standards
Understanding of clinical and regulatory requirements for diagnostic applications
Knowledge of software development best practices and version control systems
Strong analytical and problem-solving abilities

Other

Must be legally authorized to work in the United States without sponsorship now or in the future
Must be able to pass a comprehensive background check and drug scre

Compensation and Benefits

The salary range estimated for this position based in California is $129,400.00–$165,000.00.

This position may also be eligible to receive a variable annual bonus based on company, team, and/or individual performance results in accordance with company policy. We offer a comprehensive Total Rewards package that our U.S. colleagues and their families can count on, which includes:

A choice of national medical and dental plans, and a national vision plan, including health incentive programs
Employee assistance and family support programs, including commuter benefits and tuition reimbursement
At least 120 hours paid time off (PTO), 10 paid holidays annually, paid parental leave (3 weeks for bonding and 8 weeks for caregiver leave), accident and life insurance, and short- and long-term disability in accordance with company policy
Retirement and savings programs, such as our competitive 401(k) U.S. retirement savings plan
Employees’ Stock Purchase Plan (ESPP) offers eligible colleagues the opportunity to purchase company stock at a discount

For more information on our benefits, please visit: https://jobs.thermofisher.com/global/en/total-rewards

Apply Now

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java/perl developer jobs in san ramon, ca

Staff Scientist, Bioinformatics

Software Developer

Software Dev Engineer II

Senior Mechanical Engineering Analyst

Software Development Engineer, Aurora MySQL Engine

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