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Data Engineer - Research Informatics

Montefiore Einstein -
Yonkers, NY

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Job Details

Full-time
$128,000 - $160,000 a year

Qualifications

Data Integration (Data management)
Cloud data warehouses
HIPAA
Git
Scalable systems
Information security
SQL
ETL process automation
Clinical research compliance
Healthcare privacy protection
Version control systems
Health information regulatory compliance
Scalability
S3
Research regulatory compliance
IRB compliance
DevOps automation
Python
Database software proficiency

Full Job Description

City/State:

Yonkers, New York

Grant Funded:

Department:

IT - Data & Analytics Health Research Informatics

Work Shift:

Day

Work Days:

MON-FRI

Scheduled Hours:

8:30 AM-5 PM

Scheduled Daily Hours:

7.5 HOURS

Pay Range:

$128,000.00-$160,000.00

Montefiore Medical Center is nationally recognized for clinical excellence—breaking new ground in research, training the next generation of healthcare leaders, and delivering science-driven, patient-centered care. Montefiore is ranked among the top hospitals nationally and regionally by U.S. News & World Report. For more than 100 years, we have been innovating new treatments, procedures, and approaches to patient care, producing stellar outcomes, and raising the bar for medical centers in the region and worldwide. As we build on this momentum, we continue to advance the practice of medicine and set the standard for excellence. Our workforce is among the most diverse in the US: Montefiore associates speak 60+ languages.

Position Summary:

The Data Engineer, Research Informatics plays a critical role in enabling data-driven clinical and translational research across Montefiore. This position is responsible for designing, building, and maintaining scalable data pipelines and research-ready datasets that integrate complex, multi-source healthcare and research data, including EHR systems, clinical registries, and external datasets.

Working at the intersection of clinical care and scientific discovery, the Data Engineer develops robust data models and infrastructure to support key research use cases such as cohort identification, longitudinal patient tracking, clinical trials, and real-world evidence generation. This role emphasizes data quality, reproducibility, and compliance with regulatory standards, ensuring that data assets are reliable, secure, and suitable for research use.

The Data Engineer will work closely with clinical researchers, biostatisticians, data scientists, and cross-functional teams to translate complex research and clinical questions into scalable data solutions. In addition, this role will collaborate side by side with data engineers across the broader Montefiore data organization, aligning with enterprise data standards, platforms, and best practices to ensure consistency, scalability, and interoperability across clinical, operational, and research domains.

This role also contributes to the advancement of enterprise research data platforms, supporting secure data access, governance, and innovation in analytics to improve patient outcomes and accelerate scientific discovery.

Key Responsibilities:

Design, build, and automate robust, scalable data pipelines for ingesting, transforming, and loading both structured and unstructured data from diverse internal and external sources, including EHR systems (e.g., Epic Clarity/Caboodle), clinical research systems, registries, and third-party research datasets
Design, develop, and support data models and schemas to enable integration of clinical and research data, supporting use cases such as cohort identification, longitudinal patient tracking, and research analytics
Implement CI/CD pipelines and best practices for data engineering assets, ensuring reproducibility, version control, and reliable deployment of research data pipelines and datasets
Design and implement rules-driven data quality frameworks that enhance observability, transparency, and auditability of research data, supporting compliance with regulatory and research standards (e.g., HIPAA, IRB protocols), and enabling rapid identification and remediation of data issues
Develop and maintain research-ready datasets that support clinical trials, observational studies, population health research, and real-world evidence generation
Integrate and harmonize data across heterogeneous sources, including structured EHR data, unstructured clinical notes, imaging metadata, genomics, and patient-reported outcomes, to enable advanced analytics and data science workflows
Collaborate with product managers, clinical researchers, biostatisticians, data scientists, BI developers, and application teams to understand research and clinical questions, and translate them into scalable, high-quality data solutions
Support secure data access, governance, and de-identification processes to enable compliant use of data for research purposes while protecting patient privacy
Contribute to the development and enhancement of enterprise research data platforms and data products that accelerate scientific discovery and improve patient outcomes

Required:

5+ years of experience in data engineering, with a focus on building and supporting scalable data pipelines and modern data architectures
Strong proficiency in SQL and experience with Snowflake or similar cloud data platforms
Experience with ELT/ETL tools such as dbt, Matillion, or similar frameworks; proficiency in Python for data transformation and pipeline development
Experience with AWS (S3, compute services), Git, and DevOps workflows
Understanding of data privacy, security, and regulatory considerations in a research environment (HIPAA, IRB, data use agreements)
Bachelor’s or Master’s degree in Computer Science, Engineering, Biomedical Informatics, or a related field

Preferred

Experience working with healthcare and/or research data, including EHR systems (Epic Clarity, Caboodle preferred), clinical registries, or real-world data sources
Familiarity with research data standards and models (e.g., OMOP, FHIR, CDISC) is a plus

Montefiore Health System, Inc. is an equal employment opportunity employer. Montefiore Health System, Inc. will recruit, hire, train, transfer, promote, layoff and discharge associates in all job classifications without regard to their race, color, religion, creed, national origin, alienage or citizenship status, age, gender, actual or presumed disability, history of disability, sexual orientation, gender identity, gender expression, genetic predisposition or carrier status, pregnancy, military status, marital status, or partnership status, or any other characteristic protected by law.

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