Top 13 Bioinformatics scientist Jobs in San Diego, Ca

Scientist II, Bioinformatics QC
Aspen Neuroscience —San Diego, CA
- $129,600 - $158,400 a year
- Weekends as needed
- 3 years
- Continuous improvement
- Doctor of Philosophy
- Health insurance
- Dental insurance
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8d
Senior Scientist, Bioinformatics
Kenai Therapeutics —San Diego, CA
- $140,000 - $155,000 a year
- Full-time
- Hybrid work
- 3 years
- Analysis skills
- Doctor of Philosophy
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Senior Staff Engineer/Scientist, Bioinformatics
Foresite Labs (Stealth Co) —San Diego, CA
- $202,000 - $215,000 a year
- Full-time
- 6 years
- Computer Science
- Doctor of Philosophy
Principal Bioinformatician
Hologic —San Diego, CA
- $129,700 - $216,200 a year
- Azure
- AWS
- Analysis skills
9d
RESEARCH ASSISTANT I
Sanford Burnham Prebys Medical Discovery Institute —San Diego, CA
- $43,000 a year
- Full-time
- Computer Science
- Bachelor of Science
- Analysis skills
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Assistant, Associate, or Full Project Scientist or Research Scientist - Anesthesiology
UC San Diego —San Diego, CA
- $76,700 - $136,300 a year
- Online Application
- Mid-level
- University
- Doctor of Philosophy
Data Scientist III - Temporary
Veracyte —San Diego, CA
- $63 - $72 an hour
- Temporary
- Remote
- Azure
- Master's degree
- SQL
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POSTDOCTORAL ASSOCIATE
Sanford Burnham Prebys Medical Discovery Institute —San Diego, CA
- $70,304.00 - $77,334.40 a year
- Full-time
- Computer science
- Computer Science
- Doctor of Philosophy
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Data Scientist III
Sapient Bioanalytics —San Diego, CA
- $0 a year
- Full-time
- SQL
- AWS
- Doctor of Philosophy
Quick Apply
POSTDOCTORAL ASSOCIATE - BRENNER LAB
Sanford Burnham Prebys Medical Discovery Institute —San Diego, CA
- $70,304.00 - $77,334.40 a year
- Analysis skills
- Doctor of Philosophy
- Organizational skills
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8d

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Scientist II, Bioinformatics QC
Aspen Neuroscience —San Diego, CA
PhD in Bioinformatics, Genomics, Computational Biology, or related field (or equivalent combination of education and relevant experience).
$129,600 - $158,400 a year
Quick Apply
8d
Senior Scientist, Bioinformatics
Kenai Therapeutics —San Diego, CA
Experience in cell therapy research, manufacturing analytics, or related cell-based therapeutic modalities. This candidate brings scientific rigor, deep hands-…
$140,000 - $155,000 a year
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Research Scientist - Biomedical Informatics
The Ohio State University —Columbus, OH
The successful candidate will drive independent research programs, develop novel computational methodologies, and contribute to high-impact publications and…
2d
IGM Bioinformatics Scientist Senior
Nationwide Children's Hospital —Columbus, OH
Supports the needs of all aspects of NGS analysis including data generation, analysis, and interpretation, preparing novel methods and technologies for research…

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Scientist II, Bioinformatics QC

Aspen Neuroscience
San Diego, CA

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Job Details

Full-time
$129,600 - $158,400 a year
8 days ago

Benefits

Health insurance
On-site gym
Dental insurance

Qualifications

GMP for research safety and compliance
Manufacturing company experience

Full Job Description

Aspen Neuroscience is seeking a Scientist II, Bioinformatics QC to join our team. In this role you will be taking ownership of a critical priority, bringing together multiple teams and ensuring the quality of our product, contributing directly to delivering novel cell therapy to patients. You will be responsible for applying bioinformatics and genomics expertise supporting Quality Control operations for clinical-stage cell therapy manufacturing. In being responsible for executing and analyzing multi-omics QC workflows, as well as improving our bioinformatics processes, you will directly impact & influence the lives of patients with Parkinsons Disease. This is an on-site role in Torrey Pines, CA that requires flexibility and availability for weekend and holiday work as needed. Relocation is not available.

DUTIES AND RESPONSIBILITIES:

Execute bioinformatics QC analyses across multi-omics assays (e.g., RNA-seq, WGS, structural variation, epigenetic profiling) to support product quality assessment and release
Analyze and interpret data against established acceptance criteria; escalate atypical results and support investigation activities
Prepare and maintain compliant documentation supporting QC review, deviation investigations, and audit readiness
Support root cause analysis and re-analysis workflows for QC deviations and process excursions
Maintain traceability of data, methods, and outputs in alignment with GMP and data integrity expectations
Collaborate with QC, QA, Manufacturing, and R&D teams to support sample processing timelines and data delivery
Contribute to process improvements, workflow optimization, and automation initiatives for bioinformatics QC
Assist in development and evaluation of new analytical methods to support characterization of product lots and intermediates
Support qualification and validation activities for bioinformatics pipelines and systems

EDUCATION AND EXPERIENCE:

PhD in Bioinformatics, Genomics, Computational Biology, or related field (or equivalent combination of education and relevant experience)
Hands-on experience with NGS data analysis pipelines (RNA-seq, WGS, or similar)
3 or more years of experience working in the life sciences industry or other regulated environments (GMP/GxP), including understanding of data integrity expectations

JOB SPECIFICATIONS:

Genomics Expertise: Strong understanding of human genetics and genomics, including variant analysis, gene expression, and structural variation in applied settings
Programming: Proficiency in scripting and data analysis tools (e.g., Python, R, Bash) to support reproducible workflows
Data Quality: Excellent attention to detail with demonstrated ability to produce accurate, high-quality, and traceable datasets
QC/QA Processes: Familiarity with QC and QA workflows, documentation practices, and audit readiness requirements
Biological Interpretation: Ability to interpret biological and genomics data in clinical or translational contexts to support QC decision-making
Communication: Strong written and verbal communication skills, with the ability to clearly document and explain analytical methods and results
Scientific Judgment: Comfort working with ambiguity and applying scientific reasoning to analyze and troubleshoot real-world datasets
Validation & Systems: Exposure to qualification and validation of bioinformatics systems and pipelines in regulated environments
Workflow Design: Ability to contribute to the design, improvement, and scaling of bioinformatics workflows and organizational systems

WORKING CONDITIONS

Office and Lab environment. While performing the duties of this Job, the employee is frequently exposed to toxic or caustic chemicals. This is an indoor position requiring the ability to perform experiments in the laboratory, and type and use a computer. No Cleanroom access needed

PHYSICAL DEMANDS

While performing the duties of this Job, the employee is regularly required to stand; walk; sit; use hands to finger, handle, or feel; reach with hands and arms and talk or hear. The employee must occasionally lift and/or move up to 10 pounds. Specific vision abilities required by this job include close vision, distance vision, color vision, peripheral vision, depth perception and ability to adjust focus. These work environment characteristics are representative of the environment the job holder will encounter. Reasonable accommodation may be made to enable people with disabilities to perform the essential functions of the job.

EEO and Employment Eligibility:

Aspen Neuroscience is committed to providing equal employment opportunities to all employees and job applicants and prohibits discrimination and harassment of any type. We are committed to creating an inclusive environment for all employees. Aspen is not able to provide visa sponsorship for this role. Applicants must have valid work authorization that does not require employer sponsorship now or in the future.

Total Rewards and Culture:

Aspen Neuroscience, Inc., located in scenic Torrey Pines, is noted for its collaborative and learning focused culture where each person is valued for contributing their strengths and energy to building a world-class line of products for patients in need. The company offers a competitive total compensation package, time-off in addition to Company observed holidays, Medical/Dental insurance benefits, onsite gym, and other wellness perks.

The anticipated salary range for candidates who will work in San Diego is $129,600-$158,400 annually. The final salary offered to a successful candidate will be dependent on several factors that may include but are not limited to the type and length of experience within the industry, education, etc. Aspen Neuroscience is multi-state employer, and this salary range may not reflect positions that work in other states.

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Refine Your Search

bioinformatics scientist jobs in san diego, ca

Scientist II, Bioinformatics QC

Senior Scientist, Bioinformatics

Senior Staff Engineer/Scientist, Bioinformatics

Principal Bioinformatician

RESEARCH ASSISTANT I

Assistant, Associate, or Full Project Scientist or Research Scientist - Anesthesiology

Data Scientist III - Temporary

POSTDOCTORAL ASSOCIATE

Data Scientist III

POSTDOCTORAL ASSOCIATE - BRENNER LAB

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