Top 46 Bioinformatics engineer Jobs in San Francisco Ca

Bioinformatics Production Engineer
Natera —San Francisco, CA
- $114,400 - $143,000 a year
- Computer Science
- Mid-level
- Master's degree
- Commuter assistance
- Health insurance
12d
Bioinformatics Engineer
Teiko —San Mateo, CA
- Full-time
- Azure
- Computer Science
- Master's degree
Quick Apply
Senior Bioinformatics Research Engineer
Freenome —Brisbane, CA
- $161,925 - $227,325 a year
- Azure
- Computer Science
- Bachelor of Science
7d
Scientist/Engineer, Machine Learning / Bioinformatics
Moonwalk Biosciences, Inc. —South San Francisco, CA
- $130,000 - $173,000 a year
- Full-time
- Computer Science
- 3 years
- Doctor of Philosophy
Quick Apply
Staff Bioinformatics Scientist, Oncology Applications
Ultima Genomics —San Francisco, CA
- $135,000 - $170,000 a year
- Full-time
- Remote
- Computer Science
- 8 years
- AWS
- Health savings account
- Paid holidays
Quick Apply
Research Scientist, Life Sciences (Computational)
Anthropic —San Francisco, CA
- $300,000 - $320,000 a year
- Hybrid work
- Computer Science
- Office
- Databases
- Parental leave
- Flexible schedule
Research Scientist, Life Sciences
Anthropic —San Francisco, CA
- $300,000 - $320,000 a year
- Hybrid work
- 5 years
- Office
- Bachelor's degree
- Parental leave
- Flexible schedule
Bioinformatics Scientist
Tempus —Redwood City, CA
- $100,000 - $140,000 a year
- Full-time
- Computer science
- Computer Science
- 3 years
- Health insurance
Software Engineer
Teiko —San Mateo, CA
- Full-time
- Azure
- Computer Science
- System design
Quick Apply
AI Biologist - Biosurveillance
LatchBio —San Francisco, CA
- $120,000 - $180,000 a year
- Full-time
- Hybrid work
- Mid-level
- 3 years
- Quality control
- Flexible schedule
Quick Apply
Senior Data Engineer, Bioinformatics, Cheminformatics, Materials
Lila Sciences —San Francisco, CA
- $144,000 - $240,000 a year
- Mid-level
- SQL
- 2 years
Quick Apply
5d
Computational Scientist
Tamarind Bio —San Francisco, CA
- Full-time
- APIs
- Senior level
Senior Software Engineer II
Freenome —Brisbane, CA
- $161,925 - $227,325 a year
- Remote
- Azure
- Computer Science
- Bachelor of Science
(Senior) ML Scientist
insitro —South San Francisco, CA
- $183,000 - $238,000 a year
- Full-time
- Hybrid work
- Azure
- Computer Science
- Office
- Paid parental leave
- Health insurance
Senior Staff Scientist-Quantitative Modeling, AI & Pharmacometrics
University of California San Francisco —San Francisco, CA
- Full-time
- Current TB test
- Computer Science
- 5 years
Advisor - Agent Research
Eli Lilly —San Francisco, CA
- $151,500 - $222,200 a year
- Full-time
- Computer science
- Azure
- Computer Science
- Health insurance
- Dental insurance
AI Biologist - Function
LatchBio —San Francisco, CA
- $120,000 - $180,000 a year
- Full-time
- Hybrid work
- US work authorization
- Senior level
- Python
- Flexible schedule
Quick Apply
Senior Scientific Software Engineer, Analytics and Workflows
Genentech —San Francisco, CA
- $142,500 - $264,700 a year
- Online Application
- Computer Science
- Master's degree
- Analysis skills
Biostatistician II
Karius —Redwood City, CA
- $117,446 - $176,168 a year
- Full-time
- Remote
- Mid-level
- 3 years
- Master's degree
Quick Apply
Senior Bioinformatics Scientist
CEDENT —South San Francisco, CA
- 3 years
- Master's degree
- SQL

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Bioinformatics Production Engineer

Natera -
San Francisco, CA

Apply Now

Job Details

$114,400 - $143,000 a year
12 days ago

Benefits

Commuter assistance
Health insurance
Dental insurance
401(k)
Vision insurance
Referral program

Qualifications

DNA analysis
Bachelor's degree

Full Job Description

POSITION SUMMARY:

The Bioinformatics Production Analyst performs basic data analysis to provide bioinformatics support for Horizon Carrier Screening and future platform sequencing tests, while actively participating in production pipeline improvements. In this role, the analyst plays a pivotal part in ensuring Natera provides high-quality carrier screening and sequencing products.

PRIMARY RESPONSIBILITIES:

Data Analysis & Processing: Analyze high-throughput DNA sequencing data and perform basic data analysis to support product development, validation studies, and incoming experiment analysis requests.
Pipeline Improvement & Support: Help move data through the analysis pipeline while proactively identifying and implementing improvements to production workflows.
Troubleshooting: Investigate and resolve technical issues related to data quality, analysis pipelines, and system integration.
Cross-Functional Collaboration: Communicate effectively and work collaboratively with cross-functional teams, including biology, software engineering, lab operations, and medical/legal affairs.
Documentation: Produce high-quality written documentation, including formal study plans and technical reports.
Compliance & PHI Safety: Regularly handle Protected Health Information (PHI) in both paper and electronic formats, ensuring strict adherence to data privacy technologies and protocols.
Training & Certification: Complete required HIPAA/PHI privacy, security, and General Policies and Procedures Compliance training within the first 30 days of hire, and maintain current status on all ongoing company training requirements.

QUALIFICATIONS:

Minimum Qualifications:

Bachelor's degree in Biomedical Engineering, Computer Science, Bioinformatics, or a related equivalent field.
2+ years of relevant professional experience.

Preferred Qualifications:

Master's degree in a relevant scientific or technical discipline.
Previous professional experience within the biotechnology, diagnostics, or pharmaceutical industry.

KNOWLEDGE, SKILLS, AND ABILITIES:

Knowledge of biological concepts related to molecular biology, cell biology (specifically related to DNA/RNA), and genetics.
Experience and knowledge of how Sequencing Assays work.
Experience using Python for data analysis and plotting is preferred.
Experience using Linux command-line tools and relational databases (SQL) preferred, knowledge of data visualization tools/platforms a plus (plotly).
Knowledge of genomics, relevant NGS analyses (mapping, variant calling, etc.), and NGS file types is required. e.g. Know how to run pipelines and knowledge of pipeline platforms/languages (WDL, Nextflow).
Ability to produce high quality written documentation for varying audiences, e.g. validation reports
Familiarity with Large Language Models (LLMs), such as Claude Code, and how to leverage them to streamline workflows and tasks.
Ability to work independently while managing multiple objectives and timelines.
Desire to work in a fast-paced environment with potential for high impact in a small team.
Team player, self-motivated, and detail-oriented.

OUR OPPORTUNITY

Natera™ is a global leader in cell-free DNA (cfDNA) testing, dedicated to oncology, women's health, and organ health. Our aim is to make personalized genetic testing and diagnostics part of the standard of care to protect health and enable earlier and more targeted interventions that lead to longer, healthier lives.

The Natera team consists of highly dedicated statisticians, geneticists, doctors, laboratory scientists, business professionals, software engineers and many other professionals from world-class institutions, who care deeply for our work and each other. When you join Natera, you'll work hard and grow quickly. Working alongside the elite of the industry, you'll be stretched and challenged, and take pride in being part of a company that is changing the landscape of genetic disease management.

WHAT WE OFFER

Competitive Benefits - Employee benefits include comprehensive medical, dental, vision, life and disability plans for eligible employees and their dependents. Additionally, Natera employees and their immediate families receive free testing in addition to fertility care benefits. Other benefits include pregnancy and baby bonding leave, 401k benefits, commuter benefits and much more. We also offer a generous employee referral program!

For more information, visit www.natera.com.

Natera is proud to be an Equal Opportunity Employer. We are committed to ensuring a diverse and inclusive workplace environment, and welcome people of different backgrounds, experiences, abilities and perspectives. Inclusive collaboration benefits our employees, our community and our patients, and is critical to our mission of changing the management of disease worldwide.

All qualified applicants are encouraged to apply, and will be considered without regard to race, color, religion, gender, gender identity or expression, sexual orientation, national origin, genetics, age, veteran status, disability or any other legally protected status. We also consider qualified applicants regardless of criminal histories, consistent with applicable laws.

If you are based in California, we encourage you to read this important information for California residents.

Link: https://www.natera.com/notice-of-data-collection-california-residents/

Please be advised that Natera will reach out to candidates with a @natera.com email domain ONLY. Email communications from all other domain names are not from Natera or its employees and are fraudulent. Natera does not request interviews via text messages and does not ask for personal information until a candidate has engaged with the company and has spoken to a recruiter and the hiring team. Natera takes cyber crimes seriously, and will collaborate with law enforcement authorities to prosecute any related cyber crimes.

For more information:

BBB announcement on job scams
FBI Cyber Crime resource page

Apply Now

Refine Your Search

bioinformatics engineer jobs in san francisco ca

Bioinformatics Production Engineer

Bioinformatics Engineer

Senior Bioinformatics Research Engineer

Scientist/Engineer, Machine Learning / Bioinformatics

Staff Bioinformatics Scientist, Oncology Applications

Research Scientist, Life Sciences (Computational)

Research Scientist, Life Sciences

Bioinformatics Scientist

Software Engineer

AI Biologist - Biosurveillance

Senior Data Engineer, Bioinformatics, Cheminformatics, Materials

Computational Scientist

Senior Software Engineer II

(Senior) ML Scientist

Senior Staff Scientist-Quantitative Modeling, AI & Pharmacometrics

Advisor - Agent Research

AI Biologist - Function

Senior Scientific Software Engineer, Analytics and Workflows

Biostatistician II

Senior Bioinformatics Scientist

I want to receive the latest job alert for bioinformatics engineer in san francisco ca

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