Top 29 Computational biology Jobs in Carlsbad Ca

Scientist III, Bioinformatics
Thermo Fisher Scientific —Carlsbad, CA
- $95,900 - $127,800 a year
- Full-time
- Background check
- Computer Science
- Pass drug screening
- Commuter assistance
- Paid parental leave
Computational Biology Post Doctorate Fellow, Biomarker Department
Ionis Pharmaceuticals, Inc. —Carlsbad, CA
- $65,000 - $87,000 a year
- Hybrid work
- Presentation skills
- Doctor of Philosophy
- Quality control
Quick Apply
Computational Biologist - ACTRI - Hybrid
UC San Diego Health —San Diego, CA
- $125,370 - $135,000 a year
- 8 hour shift
- Hybrid work
- 5 years
- Pass drug screening
- Office
1d
Scientist, Computational & Digital Pathology
AcelaBio Inc. —San Diego, CA
- $150,000 - $200,000 a year
- Full-time
- Hybrid work
- 7 years
- English
- Analysis skills
Quick Apply
Protein Scientist, Assistant Director or Associate Director
Ionis Pharmaceuticals, Inc. —Carlsbad, CA
- $144,200 - $196,444 a year
- Hybrid work
- Management
- 5 years
- Doctor of Philosophy
Quick Apply
Post Doctorate Fellow, Discovering Receptors That Enable Targeted Oligonucleotide Delivery to Immune Cells
Ionis Pharmaceuticals, Inc. —Carlsbad, CA
- $65,000 - $87,000 a year
- Full-time
- Hybrid work
- Doctor of Philosophy
- Senior level
- Communication skills
Quick Apply
Senior Scientist, Bioinformatics
Kenai Therapeutics —San Diego, CA
- $140,000 - $155,000 a year
- Full-time
- Hybrid work
- 3 years
- Analysis skills
- Doctor of Philosophy
Quick Apply
R&D engineer
Debut Biotechnology —San Diego, CA
- From $80,000 a year
- Full-time
- Hybrid work
- Mid-level
- Analysis skills
- Bachelor's degree
- Health insurance
- 401(k)
Quick Apply
3d
Staff Research Associate 1
UC San Diego —San Diego, CA
- $30.12 - $35.93 an hour
- Overtime
- Background check
- Bachelor of Science
- Maintenance
RESEARCH ASSISTANT I
Sanford Burnham Prebys Medical Discovery Institute —San Diego, CA
- $43,000 a year
- Full-time
- Computer Science
- Bachelor of Science
- Analysis skills
Quick Apply
Principal Bioinformatician
Hologic —San Diego, CA
- $129,700 - $216,200 a year
- Azure
- AWS
- Analysis skills
Functional Genomics Senior Scientist/Assistant Director
Ionis Pharmaceuticals, Inc. —Carlsbad, CA
- $157,542 - $214,637 a year
- Hybrid work
- AWS
- Analysis skills
- Doctor of Philosophy
Quick Apply
Visiting Faculty - Biological Sciences AY 2026/27
California State University —San Marcos, CA
- Part-time
- Background check
- Classroom
- Bachelor of Science
RESEARCH ASSISTANT I- Zhu Lab
The Scripps Research Institute —San Diego, CA
- $20.67 - $25.06 an hour
- Bachelor's degree
- Organizational skills
- 1 year
- Free parking
- Health savings account
4d
Postdoctoral Scientist
Eli Lilly —San Diego, CA
- $58,000 - $123,200 a year
- Full-time
- Doctor of Philosophy
- US work authorization
- Senior level
- Health insurance
- Dental insurance
10d
Associate Director, Functional Genomics, Data Science
Merck —San Diego, CA
- $176,200 - $277,300 a year
- Full-time
- Computer Science
- System design
- AWS
- Paid holidays
- Health insurance
6h
Scientific Director
WuXi AppTec —San Diego, CA
- $130,015 - $182,017 a year
- Ability to walk for extended periods
- English
- 8 years
1d
POSTDOCTORAL ASSOCIATE
Sanford Burnham Prebys Medical Discovery Institute —San Diego, CA
- $70,304.00 - $77,334.40 a year
- Full-time
- Computer science
- Computer Science
- Doctor of Philosophy
Quick Apply
POSTDOCTORAL ASSOCIATE - Andersen Lab
The Scripps Research Institute —San Diego, CA
- $70,304 - $75,353 a year
- Medicine
- Computer Science
- Doctor of Philosophy
- Free parking
- Health savings account
POSTDOCTORAL ASSOCIATE - Andersen Lab - Immunology and Microbiology
The Scripps Research Institute —San Diego, CA
- $70,304 - $75,353 a year
- Computer Science
- Doctor of Philosophy
- Mentoring
- Free parking
- Health savings account
3d

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computational biology jobs near carlsbad ca

Scientist III, Bioinformatics

Thermo Fisher Scientific -
Carlsbad, CA

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Job Details

Full-time
$95,900 - $127,800 a year

Benefits

Commuter assistance
Paid parental leave
Caregiver leave
Employee stock purchase plan
Paid holidays
Disability insurance
Health insurance
Dental insurance
401(k)
Tuition reimbursement
Paid time off
Parental leave
Employee assistance program
Vision insurance
Life insurance

Qualifications

AI models
BLAST
Bioinformatics
Statistics
Doctoral degree in statistics
Computational research
Data mining
Statistics
Computer Science
Predictive modeling analysis
Automation
In silico prediction
Statistical analysis for research
DNA sequencing
Computational Biology
Assay development
Computational modeling
3 years
Maintaining data pipelines
Doctoral degree in Computer Science
Production systems
Collaboration with product development teams
Analysis skills
Machine intelligence
Ph.D. in statistics
Doctor of Philosophy
Product management
Master of Science
Requirements analysis
Quality control

Full Job Description

Work Schedule

Standard (Mon-Fri)

Environmental Conditions

Office

Job Description

As part of the Thermo Fisher Scientific team, you’ll discover meaningful work that makes a positive impact on a global scale. Join our colleagues in bringing our Mission to life every single day to enable our customers to make the world healthier, cleaner and safer. We provide our global teams with the resources needed to achieve individual career goals while helping to take science a step beyond by developing solutions for some of the world’s toughest challenges, like protecting the environment, making sure our food is safe, or helping find cures for cancer.

Discover Impactful Work

As part of the Bioinformatics R&D team within the Clinical Next Generation Sequencing Division you will support primer design and the development of targeted sequencing panels, as well as building pipelines and algorithms for next-generation sequencing (NGS).

As a leader in life science technologies, our team empowers scientists to harness genomics to drive scientific discovery and advance clinical research in personalized medicine.

Location

This is a fully onsite role based in Carlsbad, CA or South San Francisco, CA.

A Day in the Life

Design assays for custom targeted sequencing panels for external and internal researchers
Understand key scientific questions and translate them into effective assay design strategies
Partner with external customers to understand project requirements and deliver high-quality design solutions that meet their needs
Collaborate cross-functionally with molecular biologists, product management, and other bioinformatics and software team members to support new product development, launch, troubleshooting, and optimization
Develop, maintain, and operate bioinformatics pipelines for assay design, data mining and analysis
Improve assay designs through iterative analysis of sequencing data and development of heuristics, optimization methods, and algorithms
Evaluate, implement, and scale new technologies and methods to optimize and automate pipelines for primer design

Keys to Success

Education

PhD in bioinformatics, statistics, genomics, computational biology, computer science or related field; or
MS with 3+ years of relevant industry experience

Experience

Proficiency in Python and shell scripting
Hands-on experience with bioinformatics production systems
Experience with targeted NGS sequencing, Ampliseq technology or PCR primer design is highly preferred
Experience with sequence analysis tools (BLAST, MAFFT/Clustal, Bowtie/BWA, samtools/bedtools) and strong understanding of genomic databases and annotations (GenBank/RefSeq, ENSEMBL, UCSC)
Working knowledge of statistical modeling, optimization, or machine learning applied to genomic or assay-design data
Experience applying modeling or machine learning approaches to support assay performance prediction, off-target assessment, QC flagging, or design-rule optimization is preferred

Knowledge, Skills, Abilities

Excellent communication and organizational skills
Self-motivated, collaborative, and detail-oriented
Strong problem-solving and troubleshooting skills
Commitment to delivering high-quality results with integrity and professionalism

Other

Must be legally authorized to work in the United States without sponsorship now or in the future
Must be able to pass a comprehensive background check and drug screen

Compensation and Benefits

The salary range estimated for this position based in California is $95,900.00–$127,800.00.

This position may also be eligible to receive a variable annual bonus based on company, team, and/or individual performance results in accordance with company policy. We offer a comprehensive Total Rewards package that our U.S. colleagues and their families can count on, which includes:

A choice of national medical and dental plans, and a national vision plan, including health incentive programs
Employee assistance and family support programs, including commuter benefits and tuition reimbursement
At least 120 hours paid time off (PTO), 10 paid holidays annually, paid parental leave (3 weeks for bonding and 8 weeks for caregiver leave), accident and life insurance, and short- and long-term disability in accordance with company policy
Retirement and savings programs, such as our competitive 401(k) U.S. retirement savings plan
Employees’ Stock Purchase Plan (ESPP) offers eligible colleagues the opportunity to purchase company stock at a discount

For more information on our benefits, please visit: https://jobs.thermofisher.com/global/en/total-rewards

Apply Now

Refine Your Search

computational biology jobs in carlsbad ca

Scientist III, Bioinformatics

Computational Biology Post Doctorate Fellow, Biomarker Department

Computational Biologist - ACTRI - Hybrid

Scientist, Computational & Digital Pathology

Protein Scientist, Assistant Director or Associate Director

Post Doctorate Fellow, Discovering Receptors That Enable Targeted Oligonucleotide Delivery to Immune Cells

Senior Scientist, Bioinformatics

R&D engineer

Staff Research Associate 1

RESEARCH ASSISTANT I

Principal Bioinformatician

Functional Genomics Senior Scientist/Assistant Director

Visiting Faculty - Biological Sciences AY 2026/27

RESEARCH ASSISTANT I- Zhu Lab

Postdoctoral Scientist

Associate Director, Functional Genomics, Data Science

Scientific Director

POSTDOCTORAL ASSOCIATE

POSTDOCTORAL ASSOCIATE - Andersen Lab

POSTDOCTORAL ASSOCIATE - Andersen Lab - Immunology and Microbiology

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